User Guide

This section contains comprehensive guides for using Phenotypic. It includes installation instructions, short examples, and step-by-step tutorials.

User Guide Topics

• Installation
  • Prerequisites
  • Installation Methods
  • From Source
• Development Installation
  • Verification
• Overview
  • 1. Tune pipeline and parameters
  • 2. Deploy as .py script
• Tutorials
  • 1. Getting Started
  • 2. Using ImagePipelines to process batches
  • 3. Understanding the Image Class: Data Components and Accessors
  • 4. Working with GridImage: Grid-Specific Features
  • 5. Make your own ImagePipeline
  • 6. Fitting Logistic Growth Curves
• Examples
  • Download Notebooks