All modules for which code is available
- phenotypic._shared_modules._measurement_info
- phenotypic.abc_._base_operation
- phenotypic.abc_._grid_corrector
- phenotypic.abc_._grid_finder
- phenotypic.abc_._grid_measure
- phenotypic.abc_._grid_object_detector
- phenotypic.abc_._grid_object_refiner
- phenotypic.abc_._grid_operation
- phenotypic.abc_._image_corrector
- phenotypic.abc_._image_enhancer
- phenotypic.abc_._image_operation
- phenotypic.abc_._measure_features
- phenotypic.abc_._object_detector
- phenotypic.abc_._object_refiner
- phenotypic.abc_._prefab_pipeline
- phenotypic.abc_._threshold_detector
- phenotypic.analysis._edge_correction
- phenotypic.analysis._log_growth_model
- phenotypic.analysis._tukey_outlier
- phenotypic.analysis.abc_._model_fitter
- phenotypic.analysis.abc_._set_analyzer
- phenotypic.core._grid_image
- phenotypic.core._image
- phenotypic.core._image_parts.accessors._array_accessor
- phenotypic.core._image_parts.accessors._color_accessor
- phenotypic.core._image_parts.accessors._enh_grayscale_accessor
- phenotypic.core._image_parts.accessors._grayscale_accessor
- phenotypic.core._image_parts.accessors._grid_accessor
- phenotypic.core._image_parts.accessors._objects_accessor
- phenotypic.core._image_parts.accessors._objmap_accessor
- phenotypic.core._image_parts.accessors._objmask_accessor
- phenotypic.core._image_pipeline
- phenotypic.correction._grid_aligner
- phenotypic.data._sample_image_data
- phenotypic.detect._canny_detector
- phenotypic.detect._isodata_detector
- phenotypic.detect._li_detector
- phenotypic.detect._mean_detector
- phenotypic.detect._minimum_detector
- phenotypic.detect._otsu_detector
- phenotypic.detect._round_peaks_detector
- phenotypic.detect._triangle_detector
- phenotypic.detect._watershed_detector
- phenotypic.detect._yen_detector
- phenotypic.enhance._bilateral_denoise
- phenotypic.enhance._bm3d_denoiser
- phenotypic.enhance._clahe
- phenotypic.enhance._contrast_streching
- phenotypic.enhance._gaussian_blur
- phenotypic.enhance._gaussian_subtract
- phenotypic.enhance._laplace_enhancer
- phenotypic.enhance._median_filter
- phenotypic.enhance._rank_median_enhancer
- phenotypic.enhance._rolling_ball_remove_bg
- phenotypic.enhance._sobel_filter
- phenotypic.enhance._unsharp_mask
- phenotypic.enhance._white_tophat_enhancer
- phenotypic.grid._auto_grid_finder
- phenotypic.grid._manual_grid_finder
- phenotypic.measure._measure_bounds
- phenotypic.measure._measure_color
- phenotypic.measure._measure_grid_linreg_stats
- phenotypic.measure._measure_grid_spread
- phenotypic.measure._measure_intensity
- phenotypic.measure._measure_shape
- phenotypic.measure._measure_size
- phenotypic.measure._measure_texture
- phenotypic.phenotypic_cli
- phenotypic.prefab._grid_section_pipeline
- phenotypic.prefab._heavy_otsu_pipeline
- phenotypic.prefab._heavy_round_peaks_pipeline
- phenotypic.prefab._heavy_watershed_pipeline
- phenotypic.prefab._round_peaks_pipeline
- phenotypic.refine._border_object_modifier
- phenotypic.refine._center_deviation_reducer
- phenotypic.refine._circularity_modifier
- phenotypic.refine._grid_oversized_object_remover
- phenotypic.refine._mask_fill
- phenotypic.refine._mask_opener
- phenotypic.refine._min_residual_error_reducer
- phenotypic.refine._residual_outlier_remover
- phenotypic.refine._skeletonize
- phenotypic.refine._small_object_modifier
- phenotypic.refine._thinning
- phenotypic.refine._white_tophat_modifier
- phenotypic.tools.constants_
- phenotypic.tools.exceptions_
- phenotypic.tools.funcs_
- phenotypic.tools.hdf_
- phenotypic.util._geometric_median
- phenotypic.util._grid_apply