QUALITY_OCCUPANCY#

Python object: phenotypic.schema._quality_occupancy.QUALITY_OCCUPANCY

Measurement info for the grid-occupancy QC check.

Carries the per-group cell-occupancy counts compared by the occupancy quality check: how many of a plate’s expected grid cells are filled by at least one colony (doublets collapse to one), how many cells the metadata frame declared, and how many remain empty. A high Vacant count flags plates with many missing pin positions (failed spots, dropouts) independent of any over-detection elsewhere on the plate.

Category: QC_Occupancy#

Column label

Description

Type

QC_Occupancy_Filled

Distinct grid cells holding at least one colony (doublets count once).

Quality

QC_Occupancy_Expected

Expected grid-cell count from the metadata frame (rows per group).

Quality

QC_Occupancy_Vacant

Expected - Filled; empty/missing grid cells in the group.

Quality