phenotypic.tools_.slurm.parse_job_id

phenotypic.tools_.slurm.parse_job_id(sbatch_stdout: str) → str

Extract the SLURM job ID from sbatch output.

Parameters:

sbatch_stdout (str) – Standard output from an sbatch command, typically "Submitted batch job 12345\n".

Returns:

The job ID as a string.

Raises:

RuntimeError – If the job ID cannot be parsed from the output.

Return type:

str

Examples

>>> parse_job_id("Submitted batch job 12345\n")
'12345'